RNF125

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RNF125 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RNF125-associated genes across cancer lineages are TAFA1 and ARMS2. Each is linked with RNF125 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF125-to-partner and partner-to-RNF125 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TAFA1 grouped by RNF125-low versus RNF125-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF125→partner) and Y-score (partner→RNF125) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINETAFA1 →+0.329+4.688<.001<.00131
LARGE_INTESTINEARMS2 →+0.244+3.938<.001.00531
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

TAFA1 by RNF125 expression — LARGE_INTESTINE

Box plot of TAFA1 in RNF125-low vs RNF125-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration