RNF113B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF113B mutation is significantly associated with the RNA expression of many other genes, with 2,046 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF113B-associated genes across cancer lineages are UBE2L2, SLC25A5P9, and MIR4774. Each is linked with RNF113B in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF113B-to-partner and partner-to-RNF113B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, UBE2L2 grouped by RNF113B-low versus RNF113B-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF113B→partner) and Y-score (partner→RNF113B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADUBE2L2 →+0.344+2.992.001.00632
READSLC25A5P9 →+0.175+4.724<.001.00332
READMIR4774 →+0.627+5.257<.001.00232
READMIR4797 →+0.819+5.054<.001.00132
SKCMRNA5SP444 →+0.282+5.469<.001.00232
UCECZNHIT3 →+0.415+2.981.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,046 associations by consensus.

UBE2L2 by RNF113B expression — COAD

Box plot of UBE2L2 in RNF113B-low vs RNF113B-high samples in COAD.

Explore this box plot interactively →

Exploration