RN7SKP98

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP98 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,160 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RN7SKP98-associated proteins across cancer lineages are IPO9, RFC1, and SF3B6. Each is linked with RN7SKP98 in more than 5 cancer types. Because this analysis shows association rather than direction, both RN7SKP98-to-partner and partner-to-RN7SKP98 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RN7SKP98 versus IPO9 in BRCA, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP98→partner) and Y-score (partner→RN7SKP98) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAIPO9 →+0.281+0.334.001<.00136
GBMRFC1 →+0.298+0.699<.001.00135
LSCCSF3B6 →+0.299+0.711<.001<.00135
GBMTOP2A →+0.964+1.134<.001<.00135
GBMTOPBP1 →+0.424+0.832.002<.00135
HNSCPOLD3 →+0.478+0.960<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,160 associations by consensus.

RN7SKP98 vs IPO9 — BRCA

Per-sample scatter of RN7SKP98 vs IPO9 in BRCA (Pearson r = 0.32).

Explore this scatter interactively →

Exploration