RIMS1

Across TCGA patient cohorts, RIMS1 protein abundance is significantly associated with the RNA expression of many other genes, with 15,785 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RIMS1-associated genes across cancer lineages are SNRPD3, PRODH, and GRK3. Each is linked with RIMS1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RIMS1-to-partner and partner-to-RIMS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RIMS1 versus SNRPD3 in GBM, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RIMS1→partner) and Y-score (partner→RIMS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	SNRPD3 →	+0.380	+0.455	.001	<.001	3	1
GBM	PRODH →	+1.098	+0.504	<.001	<.001	3	1
GBM	GRK3 →	+0.446	+0.437	.001	<.001	3	1
GBM	SEZ6L →	+1.169	+0.370	.002	<.001	3	1
GBM	SNU13 →	+0.318	+0.552	.004	<.001	3	1
GBM	SOX10 →	+1.317	+0.505	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,785 associations by consensus.

RIMS1 vs SNRPD3 — GBM

Explore this scatter interactively →