RFPL4A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RFPL4A mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible RFPL4A-associated genes across cancer lineages are OXT, AVPR1B, and KRTAP9-7. Each is linked with RFPL4A in more than 1 cancer types. Because this analysis shows association rather than direction, both RFPL4A-to-partner and partner-to-RFPL4A results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RFPL4A→partner) and Y-score (partner→RFPL4A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOXT →+0.063+4.977<.001.00731
SKINAVPR1B →+0.006+5.415.007.00431
LUNG_SCLCKRTAP9-7 →+0.073+5.643<.001.00231
LUNG_SCLCKRTAP9-6 →+0.136+5.643<.001.00231
LUNG_NSCLC_LUADPTH →+0.045+4.887<.001.00931
LUNG_NSCLC_LUADTEX26 →+0.025+5.228<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

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