RC3H1-IT1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RC3H1-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,618 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RC3H1-IT1-associated proteins across cancer lineages are PARP1, ARID4B, and RPRD2. Each is linked with RC3H1-IT1 in more than 4 cancer types. Because this analysis shows association rather than direction, both RC3H1-IT1-to-partner and partner-to-RC3H1-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RC3H1-IT1 versus PARP1 in HNSC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RC3H1-IT1→partner) and Y-score (partner→RC3H1-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCPARP1 →+0.385+0.628<.001<.00135
HNSCARID4B →+0.239+0.670<.001<.00135
LSCCRPRD2 →+0.364+0.745<.001<.00135
LSCCU2SURP →+0.236+0.449.001<.00134
LSCCUSP39 →+0.268+0.438<.001<.00134
GBMVEZF1 →+0.451+0.425<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,618 associations by consensus.

RC3H1-IT1 vs PARP1 — HNSC

Per-sample scatter of RC3H1-IT1 vs PARP1 in HNSC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration