RBPMS

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RBPMS protein abundance is significantly associated with the RNA expression of many other genes, with 16,483 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RBPMS-associated genes across cancer lineages are RBPMS-AS1, TRPC4, and FBLN5. Each is linked with RBPMS in more than 8 cancer types. Because this analysis shows association rather than direction, both RBPMS-to-partner and partner-to-RBPMS results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RBPMS versus RBPMS-AS1 in LUAD, with a Pearson correlation of 0.57.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBPMS→partner) and Y-score (partner→RBPMS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADRBPMS-AS1 →+0.800+0.448<.001<.00139
UCECTRPC4 →+0.737+0.390<.001<.00136
UCECFBLN5 →+1.038+0.487.001<.00136
OVLMOD1 →+2.161+1.268.006.00436
UCECSYNPO2 →+1.205+0.496.003<.00136
LSCCMSRB3 →+1.110+0.331<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,483 associations by consensus.

RBPMS vs RBPMS-AS1 — LUAD

Per-sample scatter of RBPMS vs RBPMS-AS1 in LUAD (Pearson r = 0.57).

Explore this scatter interactively →

Exploration