RBPJ

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RBPJ mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RBPJ-associated genes across cancer lineages are CASP14, SEC14L3, and MSGN1. Each is linked with RBPJ in more than 1 cancer types. Because this analysis shows association rather than direction, both RBPJ-to-partner and partner-to-RBPJ results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CASP14 grouped by RBPJ-low versus RBPJ-high in LUNG_NSCLC_LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBPJ→partner) and Y-score (partner→RBPJ) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADCASP14 →+1.411+3.695.009.00531
LARGE_INTESTINESEC14L3 →+0.023+3.994.003.00231
LARGE_INTESTINEMSGN1 →+0.056+3.345.007.00731
LARGE_INTESTINESAXO1 →+0.040+3.556.006.00731
LARGE_INTESTINEOR2AT4 →+0.015+3.196.006.00731
LARGE_INTESTINEPRND →+0.025+3.878.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

CASP14 by RBPJ expression — LUNG_NSCLC_LUAD

Box plot of CASP14 in RBPJ-low vs RBPJ-high samples in LUNG_NSCLC_LUAD.

Explore this box plot interactively →

Exploration