Across TCGA cell cohorts, RAET1G mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RAET1G-associated genes across cancer lineages are COX6A2, AGRP, and OR2C1. Each is linked with RAET1G in more than 1 cancer types. Because this analysis shows association rather than direction, both RAET1G-to-partner and partner-to-RAET1G results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAET1G→partner) and Y-score (partner→RAET1G) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	COX6A2 →	+0.068	+4.022	<.001	.006	3	1
LARGE_INTESTINE	AGRP →	+0.135	+3.994	<.001	.002	3	1
LARGE_INTESTINE	OR2C1 →	+0.101	+3.725	.002	.008	3	1
LARGE_INTESTINE	OR1L6 →	+0.018	+4.022	<.001	.006	3	1
LARGE_INTESTINE	LRRC3B →	+0.018	+3.345	<.001	.007	3	1
LARGE_INTESTINE	PRR23B →	+0.006	+4.632	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

Exploration

RAET1G survival (RNA) · tumor vs normal (RNA) · all RAET1G data types