RAD52

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAD52 mutation is significantly associated with the RNA expression of many other genes, with 882 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RAD52-associated genes across cancer lineages are RNU7-50P, MIR3935, and MTATP6P29. Each is linked with RAD52 in more than 1 cancer types. Because this analysis shows association rather than direction, both RAD52-to-partner and partner-to-RAD52 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU7-50P grouped by RAD52-low versus RAD52-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAD52→partner) and Y-score (partner→RAD52) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCARNU7-50P →+0.527+3.758<.001.00832
SKCMMIR3935 →+0.504+5.771<.001.00332
UCECMTATP6P29 →+0.232+2.674<.001.00632
UCECTRDV3 →+0.233+2.176.005.00332
BLCASPDYE9 →+0.011+5.455<.001.00131
BLCAMIR378E →+0.320+5.033.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 882 associations by consensus.

RNU7-50P by RAD52 expression — BLCA

Box plot of RNU7-50P in RAD52-low vs RAD52-high samples in BLCA.

Explore this box plot interactively →

Exploration