RAB5A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB5A protein abundance is significantly associated with the RNA expression of many other genes, with 6,234 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible RAB5A-associated genes across cancer lineages are KLHL18, SEC13, and FGD5-AS1. Each is linked with RAB5A in more than 3 cancer types. Because this analysis shows association rather than direction, both RAB5A-to-partner and partner-to-RAB5A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB5A versus KLHL18 in COAD, with a Pearson correlation of 0.22.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB5A→partner) and Y-score (partner→RAB5A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADKLHL18 →+0.358+0.161<.001.00834
CCRCCSEC13 →+0.263+0.120<.001<.00134
PDACFGD5-AS1 →+0.358+0.257<.001<.00134
OVCLEC10A →-1.008-0.276<.001<.00133
COADRAF1 →+0.620+0.278<.001<.00133
LSCCTAMM41 →+0.433+0.212<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,234 associations by consensus.

RAB5A vs KLHL18 — COAD

Per-sample scatter of RAB5A vs KLHL18 in COAD (Pearson r = 0.22).

Explore this scatter interactively →

Exploration