Across TCGA cell cohorts, RAB40C mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RAB40C-associated genes across cancer lineages are GAST, MS4A4A, and MSGN1. Each is linked with RAB40C in more than 1 cancer types. Because this analysis shows association rather than direction, both RAB40C-to-partner and partner-to-RAB40C results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB40C→partner) and Y-score (partner→RAB40C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	GAST →	+0.489	+4.095	.008	.009	3	1
LARGE_INTESTINE	MS4A4A →	+0.219	+3.678	<.001	.009	3	1
LARGE_INTESTINE	MSGN1 →	+0.100	+3.930	<.001	.003	3	1
LARGE_INTESTINE	TAFA1 →	+0.329	+4.688	<.001	<.001	3	1
LARGE_INTESTINE	C14orf180 →	+0.213	+4.155	<.001	.003	3	1

Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

Exploration

RAB40C survival (RNA) · tumor vs normal (RNA) · all RAB40C data types