RAB39B

Across TCGA patient cohorts, RAB39B protein abundance is significantly associated with the RNA expression of many other genes, with 7,164 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RAB39B-associated genes across cancer lineages are CYFIP2, STEAP3, and PCGF1. Each is linked with RAB39B in more than 2 cancer types. Because this analysis shows association rather than direction, both RAB39B-to-partner and partner-to-RAB39B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB39B versus CYFIP2 in HNSC, with a Pearson correlation of 0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB39B→partner) and Y-score (partner→RAB39B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	CYFIP2 →	+1.061	+0.838	.004	.002	3	3
GBM	STEAP3 →	-0.946	-0.423	<.001	<.001	3	3
LUAD	PCGF1 →	-0.611	-0.761	<.001	<.001	3	3
LUAD	SH2D3A →	-0.782	-0.733	.009	.001	3	3
GBM	PRKCG →	+0.626	+0.282	<.001	<.001	3	3
GBM	ITM2C →	+0.826	+0.456	.002	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,164 associations by consensus.

RAB39B vs CYFIP2 — HNSC

Explore this scatter interactively →