RAB29

Across TCGA patient cohorts, RAB29 mutation is significantly associated with the RNA expression of many other genes, with 111 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RAB29-associated genes across cancer lineages are KRT8P50, TP53TG3, and OR2AD1P. Each is linked with RAB29 in more than 1 cancer types. Because this analysis shows association rather than direction, both RAB29-to-partner and partner-to-RAB29 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRT8P50 grouped by RAB29-low versus RAB29-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB29→partner) and Y-score (partner→RAB29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	KRT8P50 →	+0.096	+2.720	.007	.009	3	2
SKCM	TP53TG3 →	+0.096	+3.622	<.001	.008	3	1
SKCM	OR2AD1P →	+0.023	+4.147	.002	.008	3	1
SKCM	NDUFB4P5 →	+0.060	+4.147	<.001	.008	3	1
SKCM	TARDBPP1 →	+0.028	+3.491	.001	.003	3	1
UCEC	IGLVIVOR22-1 →	+0.534	+3.645	.001	.003	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 111 associations by consensus.

KRT8P50 by RAB29 expression — UCEC

Explore this box plot interactively →