RAB27B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB27B mutation is significantly associated with the RNA expression of many other genes, with 1,513 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible RAB27B-associated genes across cancer lineages are DHODH, SETD6, and FTSJ3. Each is linked with RAB27B in more than 1 cancer types. Because this analysis shows association rather than direction, both RAB27B-to-partner and partner-to-RAB27B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DHODH grouped by RAB27B-low versus RAB27B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB27B→partner) and Y-score (partner→RAB27B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDHODH →+0.515+3.386<.001.00432
SKCMSETD6 →+0.492+2.521<.001<.00132
SKCMFTSJ3 →+0.370+1.781.005.00432
SKCMAPBA3 →+0.307+1.743.006.00432
SKCMEXOSC9 →+0.380+2.331.004.00332
SKCMSLC25A19 →+0.305+2.231.009.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,513 associations by consensus.

DHODH by RAB27B expression — UCEC

Box plot of DHODH in RAB27B-low vs RAB27B-high samples in UCEC.

Explore this box plot interactively →

Exploration