RAB11FIP3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB11FIP3 protein abundance is significantly associated with the RNA expression of many other genes, with 6,032 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible RAB11FIP3-associated genes across cancer lineages are RAB40C, DNAL1, and ELAPOR1. Each is linked with RAB11FIP3 in more than 3 cancer types. Because this analysis shows association rather than direction, both RAB11FIP3-to-partner and partner-to-RAB11FIP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB11FIP3 versus RAB40C in BRCA, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB11FIP3→partner) and Y-score (partner→RAB11FIP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCARAB40C →+1.181+0.498<.001.00534
BRCADNAL1 →+0.558+0.557.005.00633
LUADELAPOR1 →+2.529+0.635<.001.00433
UCECCAT →+1.052+0.390.001.00733
UCECIGSF3 →+0.931+0.479<.001<.00133
BRCACDIPT →+0.868+0.496.001.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,032 associations by consensus.

RAB11FIP3 vs RAB40C — BRCA

Per-sample scatter of RAB11FIP3 vs RAB40C in BRCA (Pearson r = 0.33).

Explore this scatter interactively →

Exploration