RAB11FIP3

Across TCGA patient cohorts, RAB11FIP3 mutation is significantly associated with the RNA expression of many other genes, with 798 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RAB11FIP3-associated genes across cancer lineages are RNU4-79P, IGHD5-24, and APOOP3. Each is linked with RAB11FIP3 in more than 1 cancer types. Because this analysis shows association rather than direction, both RAB11FIP3-to-partner and partner-to-RAB11FIP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU4-79P grouped by RAB11FIP3-low versus RAB11FIP3-high in PRAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB11FIP3→partner) and Y-score (partner→RAB11FIP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PRAD	RNU4-79P →	+0.294	+7.939	<.001	.008	3	2
UCEC	IGHD5-24 →	+0.549	+4.247	<.001	<.001	3	2
UCEC	APOOP3 →	+0.060	+2.486	.006	.008	3	2
UCEC	MIR6857 →	+0.261	+2.658	.001	.005	3	2
UCEC	OAZ1 →	+0.630	+4.075	<.001	<.001	3	2
UCEC	BNIP1 →	+0.421	+3.634	<.001	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 798 associations by consensus.

RNU4-79P by RAB11FIP3 expression — PRAD

Explore this box plot interactively →