PTPN20CP

Across TCGA patient cohorts, PTPN20CP RNA expression is significantly associated with the go_rna of many other GO terms, with 6,612 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible PTPN20CP-associated GO terms across cancer lineages are Protein sumoylation, Non-motile cilium assembly, and Circadian rhythm. Each is linked with PTPN20CP in more than 22 cancer types. Because this analysis shows association rather than direction, both PTPN20CP-to-partner and partner-to-PTPN20CP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein sumoylation grouped by PTPN20CP-low versus PTPN20CP-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PTPN20CP→partner) and Y-score (partner→PTPN20CP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Protein sumoylation →	+0.052	+0.165	<.001	<.001	3	23
ESCA	Non-motile cilium assembly →	+0.056	+0.318	<.001	<.001	3	22
STAD	Circadian rhythm →	+0.047	+0.174	<.001	<.001	3	22
STAD	Protein-containing complex disassembly →	+0.046	+0.126	<.001	.002	2	23
STAD	Positive regulation of chromosome organization →	+0.056	+0.182	<.001	<.001	3	21
ESCA	Negative regulation of telomere capping →	+0.052	+0.364	<.001	<.001	3	21

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,612 associations by consensus.

Protein sumoylation by PTPN20CP expression — STAD

Explore this box plot interactively →