PTGDS

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PTGDS mutation is significantly associated with the immune_cell of many other genes, with 2 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PTGDS-associated genes across cancer lineages are Adipocytes and Mesangial cells. Each is linked with PTGDS in more than 1 cancer types. Because this analysis shows association rather than direction, both PTGDS-to-partner and partner-to-PTGDS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Adipocytes grouped by PTGDS-low versus PTGDS-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTGDS→partner) and Y-score (partner→PTGDS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAdipocytes →+0.024+2.144.006.03631
UCECMesangial cells →+0.041+2.470.027.01131
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

Adipocytes by PTGDS expression — UCEC

Box plot of Adipocytes in PTGDS-low vs PTGDS-high samples in UCEC.

Explore this box plot interactively →

Exploration