PTENP1-AS

Across TCGA patient cohorts, PTENP1-AS mutation is significantly associated with the RNA expression of many other genes, with 3,812 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PTENP1-AS-associated genes across cancer lineages are RN7SL861P, ADAM20P2, and RNA5SP66. Each is linked with PTENP1-AS in more than 1 cancer types. Because this analysis shows association rather than direction, both PTENP1-AS-to-partner and partner-to-PTENP1-AS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL861P grouped by PTENP1-AS-low versus PTENP1-AS-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTENP1-AS→partner) and Y-score (partner→PTENP1-AS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	RN7SL861P →	+0.164	+3.847	<.001	.006	3	2
HNSC	ADAM20P2 →	+0.050	+4.526	<.001	.007	3	2
STAD	RNA5SP66 →	+0.547	+4.879	<.001	.002	3	2
LUSC	MIR5571 →	+0.361	+4.882	<.001	.005	3	2
SKCM	RNU1-19P →	+0.374	+5.682	<.001	<.001	3	2
COAD	RNU6-130P →	+1.033	+3.758	.001	.006	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,812 associations by consensus.

RN7SL861P by PTENP1-AS expression — HNSC

Explore this box plot interactively →