PSTK

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PSTK protein abundance is significantly associated with the RNA expression of many other genes, with 258 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible PSTK-associated genes across cancer lineages are TTLL1, ZC3H7B, and AMH. Each is linked with PSTK in more than 1 cancer types. Because this analysis shows association rather than direction, both PSTK-to-partner and partner-to-PSTK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PSTK versus TTLL1 in BRCA, with a Pearson correlation of 0.94.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PSTK→partner) and Y-score (partner→PSTK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATTLL1 →+1.106+0.759<.001.00131
BRCAZC3H7B →+1.016+0.759.001.00131
BRCAAMH →+2.824+0.639.002.00131
BRCAMEGF9 →+2.270+0.639.003.00131
BRCAC3orf52 →+3.849+0.759.004.00131
BRCAPPP1R8 →+0.307+0.640.002.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 258 associations by consensus.

PSTK vs TTLL1 — BRCA

Per-sample scatter of PSTK vs TTLL1 in BRCA (Pearson r = 0.94).

Explore this scatter interactively →

Exploration