PSMG2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PSMG2 protein abundance is significantly associated with the RNA expression of many other genes, with 12,062 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible PSMG2-associated genes across cancer lineages are PSMG1, PLAC9, and CCNE1. Each is linked with PSMG2 in more than 8 cancer types. Because this analysis shows association rather than direction, both PSMG2-to-partner and partner-to-PSMG2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PSMG2 versus PSMG1 in OV, with a Pearson correlation of 0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PSMG2→partner) and Y-score (partner→PSMG2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPSMG1 →+0.964+0.442<.001<.00139
CCRCCPLAC9 →-1.154-0.328<.001<.00137
UCECCCNE1 →+1.243+0.225.003.00327
LUADTTK →+1.112+0.343<.001<.00136
UCECKIF20A →+1.254+0.290<.001<.00136
HNSCABCA8 →-0.890-0.260<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,062 associations by consensus.

PSMG2 vs PSMG1 — OV

Per-sample scatter of PSMG2 vs PSMG1 in OV (Pearson r = 0.51).

Explore this scatter interactively →

Exploration