PRRT3-AS1

Across TCGA patient cohorts, PRRT3-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,253 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PRRT3-AS1-associated proteins across cancer lineages are DHX9, RBBP4, and RBM12B. Each is linked with PRRT3-AS1 in more than 4 cancer types. Because this analysis shows association rather than direction, both PRRT3-AS1-to-partner and partner-to-PRRT3-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PRRT3-AS1 versus DHX9 in GBM, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PRRT3-AS1→partner) and Y-score (partner→PRRT3-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	DHX9 →	+0.263	+0.732	<.001	<.001	3	5
GBM	RBBP4 →	+0.357	+0.574	.002	.002	3	4
GBM	RBM12B →	+0.283	+0.632	<.001	<.001	3	4
GBM	BRMS1L →	+0.327	+0.544	<.001	.001	3	4
LSCC	GTF3C4 →	+0.333	+0.510	<.001	<.001	3	4
HNSC	HCFC1 →	+0.246	+0.596	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,253 associations by consensus.

PRRT3-AS1 vs DHX9 — GBM

Explore this scatter interactively →