PRIMPOL

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PRIMPOL mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible PRIMPOL-associated genes across cancer lineages are OXT, AVPR1B, and FAM47C. Each is linked with PRIMPOL in more than 1 cancer types. Because this analysis shows association rather than direction, both PRIMPOL-to-partner and partner-to-PRIMPOL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OXT grouped by PRIMPOL-low versus PRIMPOL-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRIMPOL→partner) and Y-score (partner→PRIMPOL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOXT →+0.063+4.977<.001.00731
SKINAVPR1B →+0.006+5.415.007.00431
SKINFAM47C →+0.006+4.977<.001.00731
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

OXT by PRIMPOL expression — SKIN

Box plot of OXT in PRIMPOL-low vs PRIMPOL-high samples in SKIN.

Explore this box plot interactively →

Exploration