PRB4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRB4 mutation is significantly associated with the total protein of many other genes, with 17 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRB4-associated genes across cancer lineages are FOXO3a_pS318_S321, eIF4E, and p38-MAPK_pT180_Y182. Each is linked with PRB4 in more than 1 cancer types. Because this analysis shows association rather than direction, both PRB4-to-partner and partner-to-PRB4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FOXO3a_pS318_S321 grouped by PRB4-low versus PRB4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRB4→partner) and Y-score (partner→PRB4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFOXO3a_pS318_S321 →-0.162-2.312.007.03432
UCECeIF4E →+0.224+3.013.027.01831
UCECp38-MAPK_pT180_Y182 →-0.638-2.446.003.02031
UCECp62 Lck ligand →+0.412+3.179.008.01031
UCECPCNA →+0.296+2.999.004.03531
UCECPKC-delta_pS664 →-0.135-3.312.019.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

FOXO3a_pS318_S321 by PRB4 expression — UCEC

Box plot of FOXO3a_pS318_S321 in PRB4-low vs PRB4-high samples in UCEC.

Explore this box plot interactively →

Exploration