PPP5C

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPP5C protein abundance is significantly associated with the RNA expression of many other genes, with 9,461 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PPP5C-associated genes across cancer lineages are ZNF230, ZNF180, and IRF2BP1. Each is linked with PPP5C in more than 6 cancer types. Because this analysis shows association rather than direction, both PPP5C-to-partner and partner-to-PPP5C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PPP5C versus ZNF230 in BRCA, with a Pearson correlation of 0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPP5C→partner) and Y-score (partner→PPP5C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAZNF230 →+0.369+0.192.002.00437
HNSCZNF180 →+0.671+0.212<.001.00237
HNSCIRF2BP1 →+0.908+0.221<.001<.00137
GBMZNF227 →+0.661+0.329<.001<.00137
OVHNRNPUL1 →+0.572+0.220<.001.00136
BRCADMAC2 →+0.557+0.294<.001<.00127
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,461 associations by consensus.

PPP5C vs ZNF230 — BRCA

Per-sample scatter of PPP5C vs ZNF230 in BRCA (Pearson r = 0.29).

Explore this scatter interactively →

Exploration