PPM1J

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPM1J RNA expression is significantly associated with the protein abundance of many other proteins, with 11,110 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PPM1J-associated proteins across cancer lineages are PPM1J_S76, NRBP2, and STUB1. Each is linked with PPM1J in more than 7 cancer types. Because this analysis shows association rather than direction, both PPM1J-to-partner and partner-to-PPM1J results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PPM1J versus PPM1J_S76 in BRCA, with a Pearson correlation of 0.63.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PPM1J→partner) and Y-score (partner→PPM1J) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAPPM1J_S76 →+1.236+1.497<.001<.00138
OVNRBP2 →+0.463+0.601<.001<.00134
BRCASTUB1 →+0.397+0.904<.001<.00134
BRCAGAMT →+0.716+1.247<.001<.00134
GBML3MBTL3 →-0.424-0.444.001<.00134
GBMSDC4 →+0.656+0.438.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,110 associations by consensus.

PPM1J vs PPM1J_S76 — BRCA

Per-sample scatter of PPM1J vs PPM1J_S76 in BRCA (Pearson r = 0.63).

Explore this scatter interactively →

Exploration