PPIF

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPIF mutation is significantly associated with the total protein of many other genes, with 36 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PPIF-associated genes across cancer lineages are eIF4E, eIF4G, and A-Raf_pS299. Each is linked with PPIF in more than 1 cancer types. Because this analysis shows association rather than direction, both PPIF-to-partner and partner-to-PPIF results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by PPIF-low versus PPIF-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPIF→partner) and Y-score (partner→PPIF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.202+3.183.028.00931
UCECeIF4G →+0.368+3.321.006.01031
UCECA-Raf_pS299 →-0.127-2.321.015.03431
UCECERK2 →+0.198+2.321.018.03431
UCECFoxM1 →+0.317+2.179.005.03431
UCECFOXO3a_pS318_S321 →-0.187-2.807<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 36 associations by consensus.

eIF4E by PPIF expression — UCEC

Box plot of eIF4E in PPIF-low vs PPIF-high samples in UCEC.

Explore this box plot interactively →

Exploration