PLCG2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PLCG2 mutation is significantly associated with the RNA expression of many other genes, with 284 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PLCG2-associated genes across cancer lineages are OPRM1, FAM149A, and C1QTNF7. Each is linked with PLCG2 in more than 1 cancer types. Because this analysis shows association rather than direction, both PLCG2-to-partner and partner-to-PLCG2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLCG2→partner) and Y-score (partner→PLCG2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYOPRM1 →+0.014+3.536.001.00132
LARGE_INTESTINEFAM149A →+1.121+2.158.001.00432
LARGE_INTESTINEC1QTNF7 →+0.049+2.038.003.00932
KIDNEYSTMN2 →+0.111+3.321.003.00822
KIDNEYMYOD1 →+0.041+3.369<.001.00331
KIDNEYGADL1 →+0.042+3.807.008.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 284 associations by consensus.

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