PLA2G4E

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PLA2G4E mutation is significantly associated with the RNA expression of many other genes, with 16 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PLA2G4E-associated genes across cancer lineages are VWC2L, OR56A5, and CYP2A13. Each is linked with PLA2G4E in more than 1 cancer types. Because this analysis shows association rather than direction, both PLA2G4E-to-partner and partner-to-PLA2G4E results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLA2G4E→partner) and Y-score (partner→PLA2G4E) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaVWC2L →+0.009+3.339<.001.00631
BLOOD_LeukemiaOR56A5 →+0.021+4.569<.001.00331
BLOOD_LeukemiaCYP2A13 →+0.006+4.569<.001.00331
SKINSERPINA4 →+0.005+3.930<.001.00331
SKINZIC3 →+0.178+3.969<.001.00431
SKINOR14A16 →+0.018+5.000<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 16 associations by consensus.

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