PLA2G4A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PLA2G4A mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PLA2G4A-associated genes across cancer lineages are CD300H, SLC26A3, and OR51T1. Each is linked with PLA2G4A in more than 1 cancer types. Because this analysis shows association rather than direction, both PLA2G4A-to-partner and partner-to-PLA2G4A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD300H grouped by PLA2G4A-low versus PLA2G4A-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLA2G4A→partner) and Y-score (partner→PLA2G4A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSCD300H →+0.207+3.874.001.00631
CNSSLC26A3 →+0.049+3.975<.001.00531
BLOOD_LeukemiaOR51T1 →+0.064+4.507<.001.00131
BLOOD_LeukemiaTAFA1 →+0.606+4.149.003.00331
BLOOD_LeukemiaGSG1L2 →+0.034+4.384<.001.00631
BLOOD_LeukemiaPRSS50 →+0.034+4.066<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

CD300H by PLA2G4A expression — CNS

Box plot of CD300H in PLA2G4A-low vs PLA2G4A-high samples in CNS.

Explore this box plot interactively →

Exploration