PKP4-AS1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PKP4-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 18,394 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PKP4-AS1-associated proteins across cancer lineages are PKP4, THEMIS2, and ARAP1. Each is linked with PKP4-AS1 in more than 5 cancer types. Because this analysis shows association rather than direction, both PKP4-AS1-to-partner and partner-to-PKP4-AS1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PKP4-AS1→partner) and Y-score (partner→PKP4-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPKP4 →+0.456+0.531<.001<.00136
UCECTHEMIS2 →-0.414-0.398<.001.00535
GBMARAP1 →-0.252-0.417<.001<.00135
LSCCPKP4_S281 →+0.674+0.542<.001<.00135
LSCCSERPINB9 →-0.417-0.578<.001<.00135
GBMCD44_S697 →-0.709-0.425<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,394 associations by consensus.

Exploration