PHOX2B

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PHOX2B RNA expression is significantly associated with the go_rna of many other GO terms, with 776 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PHOX2B-associated GO terms across cancer lineages are Regulation of Golgi inheritance, Negative regulation of myoblast fusion, and Regulation of post-translational protein modification. Each is linked with PHOX2B in more than 4 cancer types. Because this analysis shows association rather than direction, both PHOX2B-to-partner and partner-to-PHOX2B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of Golgi inheritance grouped by PHOX2B-low versus PHOX2B-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PHOX2B→partner) and Y-score (partner→PHOX2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINRegulation of Golgi inheritance →+0.083+0.021.001.00534
BLOOD_LeukemiaNegative regulation of myoblast fusion →+0.054+0.007<.001.00734
UPPER_AERODIGESTIVE_TRACTRegulation of post-translational protein modification →+0.047+0.039<.001.00625
BLOOD_LeukemiaRegulation of cell cycle G1/S phase transition →+0.063+0.015<.001<.00134
BLOOD_LeukemiaPositive regulation of proteasomal ubiquitin-dependent protein catabolic process →+0.044+0.007<.001.00134
BLOOD_LeukemiaGolgi vesicle transport →+0.025+0.009.002.00334
Each partner links to its Q-omics profile. Showing the 6 strongest of 776 associations by consensus.

Regulation of Golgi inheritance by PHOX2B expression — SKIN

Box plot of Regulation of Golgi inheritance in PHOX2B-low vs PHOX2B-high samples in SKIN.

Explore this box plot interactively →

Exploration