PHF5A

Across TCGA patient cohorts, PHF5A protein abundance is significantly associated with the RNA expression of many other genes, with 16,909 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PHF5A-associated genes across cancer lineages are LINC01094, PCIF1, and SNRNP200. Each is linked with PHF5A in more than 5 cancer types. Because this analysis shows association rather than direction, both PHF5A-to-partner and partner-to-PHF5A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PHF5A versus LINC01094 in GBM, with a Pearson correlation of -0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PHF5A→partner) and Y-score (partner→PHF5A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	LINC01094 →	-0.624	-0.242	<.001	<.001	3	6
UCEC	PCIF1 →	+0.503	+0.248	<.001	<.001	3	6
HNSC	SNRNP200 →	+0.674	+0.177	<.001	<.001	3	6
HNSC	ZNF496 →	+0.526	+0.158	<.001	<.001	3	6
LSCC	NUP35 →	+0.590	+0.226	<.001	<.001	3	6
LSCC	RFC4 →	+0.841	+0.182	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,909 associations by consensus.

PHF5A vs LINC01094 — GBM

Explore this scatter interactively →