PGAM4P1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PGAM4P1 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,375 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PGAM4P1-associated proteins across cancer lineages are CCNT1, WDR75, and MPHOSPH10. Each is linked with PGAM4P1 in more than 2 cancer types. Because this analysis shows association rather than direction, both PGAM4P1-to-partner and partner-to-PGAM4P1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PGAM4P1→partner) and Y-score (partner→PGAM4P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCCNT1 →+0.284+0.297<.001<.00133
LUADWDR75 →+0.223+0.163<.001<.00132
LSCCMPHOSPH10 →+0.229+0.217.002<.00132
LSCCNACA →+0.153+0.239.003.00232
LUADNIFK →+0.246+0.191.003.00732
LSCCOLFML1 →-0.371-0.200<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,375 associations by consensus.

Exploration