PDZD7

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PDZD7 mutation is significantly associated with the RNA expression of many other genes, with 196 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PDZD7-associated genes across cancer lineages are ADAM29, KRT82, and C12orf54. Each is linked with PDZD7 in more than 1 cancer types. Because this analysis shows association rather than direction, both PDZD7-to-partner and partner-to-PDZD7 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDZD7→partner) and Y-score (partner→PDZD7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYADAM29 →+0.029+3.938<.001.00532
OVARYKRT82 →+0.009+3.700<.001.00531
OVARYC12orf54 →+0.580+4.643<.001<.00131
OVARYP2RY13 →+0.011+3.791.005.00731
BLOOD_LeukemiaNXPE4 →+0.027+4.276<.001.00731
BLOOD_LeukemiaASZ1 →+0.132+4.152<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 196 associations by consensus.

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