PCDHGB7

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PCDHGB7 mutation is significantly associated with the RNA expression of many other genes, with 30 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PCDHGB7-associated genes across cancer lineages are PRR27, NUDT10, and C4BPB. Each is linked with PCDHGB7 in more than 1 cancer types. Because this analysis shows association rather than direction, both PCDHGB7-to-partner and partner-to-PCDHGB7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRR27 grouped by PCDHGB7-low versus PCDHGB7-high in PANCREAS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDHGB7→partner) and Y-score (partner→PCDHGB7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASPRR27 →+0.017+4.614<.001.00431
BLOOD_LeukemiaNUDT10 →+1.079+3.491<.001.00931
BLOOD_LeukemiaC4BPB →+0.773+3.318<.001.00731
BLOOD_LeukemiaSYT16 →+0.092+3.584<.001.00431
BLOOD_LeukemiaWNT3A →+0.032+3.754.004<.00131
BLOOD_LeukemiaVWC2L →+0.006+3.076.003.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 30 associations by consensus.

PRR27 by PCDHGB7 expression — PANCREAS

Box plot of PRR27 in PCDHGB7-low vs PCDHGB7-high samples in PANCREAS.

Explore this box plot interactively →

Exploration