PCDHGB6

Across TCGA patient cohorts, PCDHGB6 RNA expression is significantly associated with the RNA expression of many other genes, with 16,389 significant associations in total. THYM shows the largest number of these associations.

The most reproducible PCDHGB6-associated genes across cancer lineages are PCDHGB3, PCDHGA12, and PCDHGA9. Each is linked with PCDHGB6 in more than 30 cancer types. Because this analysis shows association rather than direction, both PCDHGB6-to-partner and partner-to-PCDHGB6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCDHGB6 versus PCDHGB3 in CHOL, with a Pearson correlation of 0.60.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDHGB6→partner) and Y-score (partner→PCDHGB6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CHOL	PCDHGB3 →	+1.138	+1.167	<.001	<.001	3	30
THYM	PCDHGA12 →	+2.278	+0.869	<.001	<.001	3	30
CHOL	PCDHGA9 →	+1.367	+1.407	.008	.001	1	31
THYM	PCDHGB5 →	+1.834	+0.980	<.001	<.001	3	29
THYM	PCDHGA6 →	+1.505	+1.163	<.001	<.001	3	29
THYM	PCDHGA11 →	+2.426	+1.054	<.001	<.001	3	29

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,389 associations by consensus.

PCDHGB6 vs PCDHGB3 — CHOL

Explore this scatter interactively →