PCDHB16

Across TCGA patient cohorts, PCDHB16 protein abundance is significantly associated with the RNA expression of many other genes, with 730 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PCDHB16-associated genes across cancer lineages are LINC00893, G6PC, and TRIM50. Each is linked with PCDHB16 in more than 1 cancer types. Because this analysis shows association rather than direction, both PCDHB16-to-partner and partner-to-PCDHB16 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCDHB16 versus LINC00893 in UCEC, with a Pearson correlation of -0.70.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDHB16→partner) and Y-score (partner→PCDHB16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	LINC00893 →	-0.922	-0.472	.003	.002	3	2
BRCA	G6PC →	+0.086	+1.076	<.001	.008	3	1
BRCA	TRIM50 →	+0.468	+1.653	.004	.005	3	1
BRCA	IFNAR2 →	+0.426	+1.552	.002	.002	3	1
BRCA	CFL1 →	+0.880	+1.653	<.001	.005	3	1
BRCA	GIMAP3P →	+0.345	+1.653	.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 730 associations by consensus.

PCDHB16 vs LINC00893 — UCEC

Explore this scatter interactively →