OAS1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OAS1 mutation is significantly associated with the RNA expression of many other genes, with 3,028 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible OAS1-associated genes across cancer lineages are RNA5SP192, LSM3, and CYCSP26. Each is linked with OAS1 in more than 3 cancer types. Because this analysis shows association rather than direction, both OAS1-to-partner and partner-to-OAS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP192 grouped by OAS1-low versus OAS1-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OAS1→partner) and Y-score (partner→OAS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCRNA5SP192 →+0.161+5.579<.001.00134
UCECLSM3 →+0.637+2.874<.001<.00133
READCYCSP26 →+0.274+5.653<.001.00332
SKCMDUSP14 →+0.471+3.384.005.00432
CESCRN7SL134P →+0.105+3.874.002.00632
UCECRNA5SP412 →+0.588+1.879<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,028 associations by consensus.

RNA5SP192 by OAS1 expression — CESC

Box plot of RNA5SP192 in OAS1-low vs OAS1-high samples in CESC.

Explore this box plot interactively →

Exploration