NXPE4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NXPE4 mutation is significantly associated with the RNA expression of many other genes, with 4,059 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NXPE4-associated genes across cancer lineages are TRAIP, ITGB1BP1, and HROB. Each is linked with NXPE4 in more than 3 cancer types. Because this analysis shows association rather than direction, both NXPE4-to-partner and partner-to-NXPE4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRAIP grouped by NXPE4-low versus NXPE4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NXPE4→partner) and Y-score (partner→NXPE4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTRAIP →+0.592+2.202<.001.00134
UCECITGB1BP1 →+0.324+2.716.009.00334
SKCMHROB →+0.601+2.739<.001.00334
UCECAUNIP →+0.693+2.732.001.00234
UCECSGO1 →+0.699+2.931<.001<.00134
UCECPSMC3IP →+0.920+2.673<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,059 associations by consensus.

TRAIP by NXPE4 expression — UCEC

Box plot of TRAIP in NXPE4-low vs NXPE4-high samples in UCEC.

Explore this box plot interactively →

Exploration