NSDHL

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NSDHL protein abundance is significantly associated with the RNA expression of many other genes, with 11,627 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NSDHL-associated genes across cancer lineages are PPP1R16B, BCAP31, and MMRN1. Each is linked with NSDHL in more than 7 cancer types. Because this analysis shows association rather than direction, both NSDHL-to-partner and partner-to-NSDHL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NSDHL versus PPP1R16B in GBM, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NSDHL→partner) and Y-score (partner→NSDHL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPPP1R16B →-1.346-0.251<.001<.00138
HNSCBCAP31 →+0.789+0.217.003.00237
COADMMRN1 →-1.248-0.234<.001.00437
HNSCITM2A →-1.204-0.379<.001<.00137
GBMC7 →-1.705-0.258<.001.00137
HNSCSLC10A3 →+0.580+0.254.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,627 associations by consensus.

NSDHL vs PPP1R16B — GBM

Per-sample scatter of NSDHL vs PPP1R16B in GBM (Pearson r = -0.38).

Explore this scatter interactively →

Exploration