NRGN

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NRGN mutation is significantly associated with the RNA expression of many other genes, with 57 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NRGN-associated genes across cancer lineages are RNA5SP414, MIR7702, and RPS29P32. Each is linked with NRGN in more than 1 cancer types. Because this analysis shows association rather than direction, both NRGN-to-partner and partner-to-NRGN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP414 grouped by NRGN-low versus NRGN-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NRGN→partner) and Y-score (partner→NRGN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP414 →+0.724+2.933<.001.00631
UCECMIR7702 →+0.415+5.253<.001.00131
UCECRPS29P32 →+0.669+3.277<.001.00231
UCECMIR6784 →+0.903+3.553.007.00331
UCECMIR6894 →+0.753+2.818.001.00531
UCECRNA5SP502 →+1.198+3.315<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 57 associations by consensus.

RNA5SP414 by NRGN expression — UCEC

Box plot of RNA5SP414 in NRGN-low vs NRGN-high samples in UCEC.

Explore this box plot interactively →

Exploration