NR2C2AP

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NR2C2AP mutation is significantly associated with the RNA expression of many other genes, with 370 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NR2C2AP-associated genes across cancer lineages are OSBPL9P5, HMGN2P39, and PRPS1L1. Each is linked with NR2C2AP in more than 1 cancer types. Because this analysis shows association rather than direction, both NR2C2AP-to-partner and partner-to-NR2C2AP results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NR2C2AP→partner) and Y-score (partner→NR2C2AP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAOSBPL9P5 →+0.261+7.040<.001<.00132
COADHMGN2P39 →+0.593+4.173<.001.00332
COADPRPS1L1 →+0.208+4.063<.001.00532
COADNDUFS5P5 →+0.375+4.374<.001.00232
COADRPS11P1 →+0.327+3.646<.001.00932
COADSOD1P2 →+0.280+4.730<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 370 associations by consensus.

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