NOTCH2NLA

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NOTCH2NLA mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NOTCH2NLA-associated genes across cancer lineages are TSPY25P. Each is linked with NOTCH2NLA in more than 1 cancer types. Because this analysis shows association rather than direction, both NOTCH2NLA-to-partner and partner-to-NOTCH2NLA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TSPY25P grouped by NOTCH2NLA-low versus NOTCH2NLA-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NOTCH2NLA→partner) and Y-score (partner→NOTCH2NLA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTSPY25P →+0.094+8.066<.001.00731
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

TSPY25P by NOTCH2NLA expression — UCEC

Box plot of TSPY25P in NOTCH2NLA-low vs NOTCH2NLA-high samples in UCEC.

Explore this box plot interactively →

Exploration