NLRC4

RNA expression — cross-omics
Cross-omicsRNA → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NLRC4 RNA expression is significantly associated with the RNA expression of many other genes, with 8,643 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NLRC4-associated genes across cancer lineages are TRIM73, DNHD1, and NOXRED1. Each is linked with NLRC4 in more than 7 cancer types. Because this analysis shows association rather than direction, both NLRC4-to-partner and partner-to-NLRC4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NLRC4 versus TRIM73 in OVARY, with a Pearson correlation of 0.51.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NLRC4→partner) and Y-score (partner→NLRC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYTRIM73 →+1.484+0.263<.001<.00137
PANCREASDNHD1 →+1.316+0.206<.001<.00128
OVARYNOXRED1 →+0.344+0.246<.001<.00136
UPPER_AERODIGESTIVE_TRACTYJEFN3 →+1.740+0.255<.001<.00136
UPPER_AERODIGESTIVE_TRACTTTC17 →+0.870+0.168<.001<.00136
BLOOD_LeukemiaC1orf162 →+1.991+0.466<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,643 associations by consensus.

NLRC4 vs TRIM73 — OVARY

Per-sample scatter of NLRC4 vs TRIM73 in OVARY (Pearson r = 0.51).

Explore this scatter interactively →

Exploration