NIPA1

mutation — cross-omics
Cross-omicsMUTATION → DRUGCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NIPA1 mutation is significantly associated with the drug of many other genes, with 8 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NIPA1-associated genes across cancer lineages are VE-822, GSK2276186C, and 630600. Each is linked with NIPA1 in more than 1 cancer types. Because this analysis shows association rather than direction, both NIPA1-to-partner and partner-to-NIPA1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VE-822 grouped by NIPA1-low versus NIPA1-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NIPA1→partner) and Y-score (partner→NIPA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEVE-822 →+0.599+2.646.036.04731
LARGE_INTESTINEGSK2276186C →+0.533+2.649.020.04631
LARGE_INTESTINE630600 →+0.690+2.649.026.04631
LARGE_INTESTINEAT7867 →+0.571+2.652.016.04521
LARGE_INTESTINETeniposide →+0.621+2.649.019.04611
LARGE_INTESTINEDactinomycin →+0.560+2.649.016.04611
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

VE-822 by NIPA1 expression — LARGE_INTESTINE

Box plot of VE-822 in NIPA1-low vs NIPA1-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration