NIFK

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NIFK mutation is significantly associated with the RNA expression of many other genes, with 792 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NIFK-associated genes across cancer lineages are RNA5SP410, RN7SL357P, and GPR32P1. Each is linked with NIFK in more than 2 cancer types. Because this analysis shows association rather than direction, both NIFK-to-partner and partner-to-NIFK results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP410 grouped by NIFK-low versus NIFK-high in LIHC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NIFK→partner) and Y-score (partner→NIFK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIHCRNA5SP410 →+0.417+7.503<.001<.00133
BLCARN7SL357P →+0.142+5.251.002.00632
BLCAGPR32P1 →+0.182+5.588<.001.00432
UCECRN7SL354P →+0.225+2.084<.001.00132
UCECZFP91-CNTF →+0.030+1.808<.001.00732
COADRNU6-128P →+0.596+4.418<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 792 associations by consensus.

RNA5SP410 by NIFK expression — LIHC

Box plot of RNA5SP410 in NIFK-low vs NIFK-high samples in LIHC.

Explore this box plot interactively →

Exploration