NIFK

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NIFK RNA expression is significantly associated with the go_rna of many other GO terms, with 3,356 significant associations in total. CNS shows the largest number of these associations.

The most reproducible NIFK-associated GO terms across cancer lineages are RNA 5'-end processing, Maturation of SSU-rRNA, and Mitochondrial tRNA modification. Each is linked with NIFK in more than 16 cancer types. Because this analysis shows association rather than direction, both NIFK-to-partner and partner-to-NIFK results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA 5'-end processing grouped by NIFK-low versus NIFK-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NIFK→partner) and Y-score (partner→NIFK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTRNA 5'-end processing →+0.098+1.146.001<.001317
BONEMaturation of SSU-rRNA →+0.109+0.576<.001.002316
LUNG_NSCLC_LUADMitochondrial tRNA modification →+0.104+0.767<.001<.001316
CNStRNA processing →+0.051+0.535<.001<.001316
BONEMaturation of LSU-rRNA →+0.138+0.514.002.009217
UPPER_AERODIGESTIVE_TRACTMitochondrial gene expression →+0.105+0.745<.001<.001315
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,356 associations by consensus.

RNA 5'-end processing by NIFK expression — UPPER_AERODIGESTIVE_TRACT

Box plot of RNA 5'-end processing in NIFK-low vs NIFK-high samples in UPPER_AERODIGESTIVE_TRACT.

Explore this box plot interactively →

Exploration