NGRN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NGRN protein abundance is significantly associated with the RNA expression of many other genes, with 4,913 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible NGRN-associated genes across cancer lineages are HECA, BNIP3L, and TLE4. Each is linked with NGRN in more than 3 cancer types. Because this analysis shows association rather than direction, both NGRN-to-partner and partner-to-NGRN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NGRN versus HECA in BRCA, with a Pearson correlation of -0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NGRN→partner) and Y-score (partner→NGRN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAHECA →-0.478-0.396<.001<.00134
BRCABNIP3L →-0.549-0.285.001.00533
BRCATLE4 →-0.535-0.313<.001<.00133
BRCASH3PXD2A →-0.680-0.420<.001<.00133
BRCAOSBPL9 →-0.462-0.391<.001<.00133
CCRCCCNRIP1 →-0.527-0.246.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,913 associations by consensus.

NGRN vs HECA — BRCA

Per-sample scatter of NGRN vs HECA in BRCA (Pearson r = -0.35).

Explore this scatter interactively →

Exploration